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Two medicines, side by side

Misoprostol vs omeprazole

Misoprostol and omeprazole are both labeled for acid reflux and ulcers. Drugs@FDA records approvals of misoprostol since 1988 and of omeprazole since 1989. Pharmacies paid $0.719 per misoprostol 200 mcg tablet and $0.0295 per omeprazole DR 20 mg capsule (NADAC, October 7, 2026); the strengths differ, so the two prices are not like for like. Omeprazole's other strengths are brand-only: $14.75 per pen (Prilosec DR 2.5 mg suspension). In FDA's classes, misoprostol is a prostaglandin e1 analog and omeprazole a proton pump inhibitor.

Check it at the source: the misoprostol FDA label on DailyMed (effective June 4, 2026); the omeprazole FDA label on DailyMed (effective April 22, 2024).

Highlights of the misoprostol record

Misoprostol (Cytotec) · label of June 4, 2026

Boxed warning

CYTOTEC (MISOPROSTOL) ADMINISTRATION TO WOMEN WHO ARE PREGNANT CAN CAUSE BIRTH DEFECTS, ABORTION, PREMATURE BIRTH OR UTERINE RUPTURE. UTERINE RUPTURE HAS BEEN REPORTED WHEN CYTOTEC WAS ADMINISTERED IN PREGNANT WOMEN TO INDUCE LABOR OR TO INDUCE ABORTION. THE RISK OF UTERINE RUPTURE INCREASES WITH ADVANCING GESTATIONAL AGES AND WITH PRIOR UTERINE SURGERY, INCLUDING CESAREAN DELIVERY (see also PRECAUTIONS and LABOR AND DELIVERY ).

Used for

From the label: indications

Cytotec (misoprostol) is indicated for reducing the risk of NSAID (nonsteroidal anti-inflammatory drugs, including aspirin)–induced gastric ulcers in patients at high risk of complications from gastric ulcer, e.g., the elderly and patients with concomitant debilitating disease, as well as patients at high risk of developing gastric ulceration, such as patients with a history of ulcer. […]

On the market

Earliest approval on file
December 27, 1988
Generic labelers
13 labelers
Pharmacy cost
$0.719 per tablet

Supply and safety

Shortage
No current entry
Recalls
1

Highlights of the omeprazole record

Omeprazole (Prilosec) · label of April 22, 2024

Used for

From the label: indications

Omeprazole is a proton pump inhibitor (PPI) indicated for the: Treatment of active duodenal ulcer in adults ( 1.1 ) Eradication of Helicobacter pylori to reduce the risk of duodenal ulcer recurrence in adults ( 1.2 ) Treatment of active benign gastric ulcer in adults ( 1.3 ) Treatment of symptomatic gastroesophageal reflux disease (GERD) in patients 1 year of age and older ( 1.4 ) Treatment of erosive esophagitis […]

On the market

Earliest approval on file
September 14, 1989
Generic labelers
118 labelers
Pharmacy cost
$0.0295 per capsule

Supply and safety

Shortage
A presentation being discontinued
Recalls
7

Source: FDA drug labels via openFDA (Misoprostol label of June 4, 2026, Omeprazole label of April 22, 2024); NDC Directory, Drugs@FDA, NADAC, FDA shortages and recalls (October 8, 2026)

How do misoprostol and omeprazole differ on the record?

In FDA's classes, misoprostol is a prostaglandin e1 analog and omeprazole a proton pump inhibitor.

Half-life, in each label's words: Misoprostol, “In normal volunteers, Cytotec (misoprostol) is rapidly absorbed after oral administration with a T max of misoprostol …”; Omeprazole, “disease classified as Child-Pugh Class A (n=3), B (n=4) and C (n=1), the bioavailability increased to approximately …”

Only the misoprostol label carries a boxed warning.

Generics: misoprostol since 2002; omeprazole since 2002 (Drugs@FDA).

MisoprostolOmeprazole
Labeled forAcid reflux and ulcersAcid reflux and ulcers
Pharmacologic classProstaglandin E1 AnalogProton Pump Inhibitor
How it works (label)n/aOmeprazole belongs to a class of antisecretory compounds, the substituted benzimidazoles, that suppress gastric acid secretion by specific inhibition of the H + /K + ATPase enzyme system at the secretory surface of the gastric parietal …
Half-life (label)In normal volunteers, Cytotec (misoprostol) is rapidly absorbed after oral administration with a T max of misoprostol acid of 12 ± 3 minutes and a terminal half-life of 20–40 minutes.disease classified as Child-Pugh Class A (n=3), B (n=4) and C (n=1), the bioavailability increased to approximately 100% compared to healthy subjects, reflecting decreased first-pass effect, and the plasma half-life of …
Earliest approval on file (Drugs@FDA)December 27, 1988September 14, 1989
First generic approvedJuly 10, 2002November 1, 2002
Generic labelers (NDC)13 labelers118 labelers
Pharmacy cost (NADAC, each one's most listed form; strengths differ)$0.719 per tablet (Misoprostol 200 mcg tablet)$0.0295 per capsule (Omeprazole DR 20 mg capsule)
12-month price change+14%-7%
Boxed warningYesNo
Shortage nowNo current entryA presentation being discontinued
Recalls recorded17
FAERS reports (a report is not proof of cause; counts follow how widely a medicine is used)9,682446,179
DEA schedulenonenone

Source: Drugs@FDA, FDA NDC Directory, CMS NADAC of October 7, 2026, FDA shortages and recalls, FAERS via openFDA (FDA files October 8, 2026)

What next?

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