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fluconazole vs itraconazole

Side-by-side comparison of fluconazole and itraconazole Data from FDA drug databases (Orange Book, NDC Directory, recalls, shortages) covering 20,000+ approved drugs, plus CMS pricing; see our methodology.

Drug Class
fluconazole Azole Antifungal
itraconazole Azole Antifungal
Type
fluconazole Prescription
itraconazole Prescription
Summary
fluconazole

Fluconazole is an antifungal medicine. It is used to treat infections caused by fungus.

itraconazole

Itraconazole capsules are an antifungal medicine. They treat fungal infections in your body.

What It Treats
fluconazole

Fluconazole treats vaginal yeast infections. It also treats yeast infections in the mouth and esophagus. Fluconazole can also treat urinary tract infections, peritonitis, systemic Candida infections, and pneumonia. It can also treat cryptococcal meningitis. Fluconazole can also prevent candidiasis in patients undergoing bone marrow transplantation.

itraconazole

Itraconazole treats fungal infections like blastomycosis, histoplasmosis, and aspergillosis. It can help both people with healthy immune systems and those with weakened immune systems. It also treats onychomycosis, a fungal infection of the toenails or fingernails.

How It Works
fluconazole

Fluconazole works by stopping the growth of fungi. It blocks the fungus from producing a substance it needs to grow. This helps to clear up the infection.

itraconazole

Itraconazole stops fungi from growing. It does this by interfering with the production of a substance fungi need to build their cell membranes. This eventually kills the fungus and clears the infection.

Common Side Effects
fluconazole
  • Headache
  • Nausea
  • Abdominal pain
itraconazole
  • Nausea
  • Rash
  • Headache
FAERS Reports
fluconazole
  • Medicine not working 4,932
  • Using medicine for unapproved purpose 4,329
  • Fever 4,121
  • Feeling sick to your stomach 3,695
  • Loose stools 3,536
itraconazole
  • Interaction with another medicine 1,118
  • Medicine not working 1,100
  • Using the medicine for something it's not approved for 606
  • Fever 570
  • Difficulty breathing 472
Serious Warnings
fluconazole

Coadministration of other drugs known to prolong the QT interval and which are metabolized via the enzyme CYP3A4 such as erythromycin, pimozide, and quinidine are contraindicated in patients receiving fluconazole.

itraconazole

Itraconazole can cause congestive heart failure. You should not take this medicine if you have heart problems. Itraconazole can also interact with many other medicines. Some of these interactions can be dangerous or even fatal. Check with your doctor about all the medicines you take.

Pregnancy
fluconazole

Tell your doctor if you are pregnant or plan to become pregnant. Fluconazole may not be safe for your baby. Talk to your doctor about breastfeeding while taking fluconazole.

itraconazole

You should not take itraconazole if you are pregnant or plan to become pregnant. It can harm your unborn baby. Talk to your doctor about safe alternatives.

Also Compare — Nearby Drugs

How to Read This fluconazole vs itraconazole Comparison

fluconazole is classified in the Azole Antifungal drug class, while itraconazole sits within the Azole Antifungal class. Because both drugs share the same classification, they are often considered interchangeable in theory — but clinical outcomes rarely track that cleanly. Both drugs are prescription-only, so a licensed provider must authorize use.

Adverse event totals above are pulled from the FDA's Adverse Event Reporting System (FAERS). For these top-ranked reactions alone, fluconazole has 20,613 submissions while itraconazole has 3,866. Those figures reflect cumulative reporting volume — not per-patient risk — so older, widely dispensed drugs typically look worse on count alone. No direct interaction between these two drugs is listed in our FDA-derived dataset, though co-prescription still warrants pharmacist review. Serious warnings, pregnancy guidance, and contraindications can differ even when indications overlap.

A table cannot substitute for clinical judgment. Effectiveness, tolerability, drug-drug interactions with your other medications, kidney and liver function, pregnancy status, insurance formulary, and price all feed into a decision that only a licensed prescriber can make responsibly. Data here is sourced from FDA Structured Product Labels (SPL) and FAERS, both of which update as manufacturers and clinicians submit new information. This page is for educational purposes only, is not medical advice, and should not be used to self-switch between fluconazole and itraconazole — always consult your physician or pharmacist first.

Important: This comparison is for informational purposes only. Drug effects vary between individuals. Always consult your doctor or pharmacist for personalized medical advice.